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tudor groza | Phenomics – Building computational phenotyping services

tudor groza | Phenomics – Building computational phenotyping services tudor groza Tudor Groza is an experienced computer scientist with a background in knowledge representation, ontologies, natural language processing and artificial intelligence in precision . Lasiet @dienalv jaunākos tvītus par Latvijas un pasaules aktualitātēm.
0 · ‪Tudor Groza‬
1 · Tudor Groza, FAIDH
2 · Tudor Groza · CSAuthors
3 · Tudor Groza
4 · Tudor GROZA
5 · Pushing the boundaries of rare disease diagnostics with the help
6 · Phenomics – Building computational phenotyping services
7 · Leaving no patient behind! Expert recommendation in the use of

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‪Tudor Groza‬

Articles 1–20. ‪European Bioinformatics Institute‬ - ‪‪Cited by 7,169‬‬ - ‪Deep phenotyping‬ - ‪Phenotype ontologies‬ - ‪Text mining‬ - ‪Phenotype-genotype integration‬ - ‪Phenotype-driven.

Tudor Groza, FAIDH

Tudor Groza is an experienced computer scientist with a background in knowledge representation, ontologies, natural language processing and artificial intelligence in precision . Tudor Groza Department of Clinical Genetics, Department of Biomedical and Clinical Sciences, Centre for Rare Diseases in Southeast Region of Sweden, Linköping .

Tudor GROZA, Phenomics Team Leader | Cited by 4,357 | of Garvan Institute of Medical Research, Darlinghurst | Read 134 publications | Contact Tudor GROZA.Profile of Tudor Groza - Phenomics Team Leader Behind its outstanding technical infrastructure and world-renowned life science expertise, EMBL-EBI is a medium-sized organisation with a . The importance of FAIR (Findability, Accessibility, Interoperability, and Reusability) and CARE (Collective benefit, Authority to control, Responsibility, and Ethics) data .

Tudor Groza. Phenomics Team Leader. tudor [at] ebi.ac.uk. ORCID: 0000-0003-2267-8333. The acceleration of translational and clinical applications of genomic technologies relies on both .

Tudor Groza authored at least 68 papers between 2006 and 2024. Dijkstra number of four. Erdős number of three.REAL: A Retrieval-Augmented Entity Linking Approach for Biomedical Concept Recognition. Darya Shlyk | Tudor Groza | Marco Mesiti | Stefano Montanelli | Emanuele Cavalleri. .

Tudor Groza · CSAuthors

Tudor Groza

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Tudor Groza, European Bioinformatics Institute, European Molecular Biology Laboratory, Welcome Genome Campus, Hinxton CB10 1SD, UK. Federico Lopez Gomez, European Bioinformatics Institute, European Molecular Biology Laboratory, Welcome Genome Campus, Hinxton CB10 1SD, UK.

Darya Shlyk, Tudor Groza, Marco Mesiti, Stefano Montanelli, and Emanuele Cavalleri. 2024. REAL: A Retrieval-Augmented Entity Linking Approach for Biomedical Concept Recognition. In Proceedings of the 23rd Workshop on Biomedical Natural Language Processing, pages 380–389, Bangkok, Thailand. Association for Computational Linguistics.

Clara D M van Karnebeek 1 , Anne O'Donnell-Luria 2 3 , Gareth Baynam 4 , Anaïs Baudot 4 , Tudor Groza 5 6 , Judith J M Jans 7 , Timo Lassmann 8 , Mary Catherine V Letinturier 9 , Stephen B Montgomery 10 , Peter N Robinson 11 , Stefaan Sansen 12 , Ruty Mehrian-Shai 13 , Charles Steward 14 , Kenjiro Kosaki 15 , Patricia Durao 16 , Bekim . The study uses two gold standard corpora available in the literature for phenotype concept recognition: (i) a corpus of 228 scientific abstracts collected from PubMed, initially annotated and published by Groza et al. , and subsequently refined by Lobo et al. (named HPO-GS from here on); and (ii) the dev component of the corpus made available .

Tudor Groza et al. Bioinformatics. 2024. Show details. Display options. Display options Format Bioinformatics Actions. Search in PubMed Search in NLM Catalog Add to Search . 2024 Jun 24:btae406. doi: 10.1093/bioinformatics/btae406. Online ahead of print. Authors Tudor .Affiliation 1 Frank P. Lin and Richard J. Epstein, St Vincent's Hospital and The Kinghorn Cancer Centre; Frank P. Lin, Tudor Groza, Simon Kocbek, and Richard J. Epstein, Garvan Institute of Medical Research, Sydney, Australia; Frank P. Lin, Waikato Hospital, Hamilton, New Zealand; and Erick Antezana, Norwegian University of Science and Technology, Trondheim, Norway.

Elliot Sollis 1 , Abayomi Mosaku 1 , Ala Abid 1 , Annalisa Buniello 2 , Maria Cerezo 1 , Laurent Gil 3 4 , Tudor Groza 1 , Osman Güneş 1 , Peggy Hall 5 , James Hayhurst 1 , Arwa Ibrahim 1 , Yue Ji 1 , Sajo John 1 , Elizabeth Lewis 1 , Jacqueline A L MacArthur 1 , Aoife McMahon 1 , David Osumi-Sutherland 1 , Kalliope Panoutsopoulou 1 , Zoë . 1 Introduction. The effectiveness of utilizing ontology-encoded knowledge in rare diseases has been consistently demonstrated through data sharing (Taruscio et al. 2015, Boycott et al. 2022, Jacobsen et al. 2022), as well as in clinical variant prioritization and interpretation (Smedley et al. 2016, Clark et al. 2018, Son et al. 2018) over the years.The Human Phenotype .Vizitați profilul lui Tudor Groza pe LinkedIn, o comunitate profesională de 1 miliard de membri. Salutare! Numele meu este Tudor și sunt aici pentru a cauta experiente noi, care ar putea sa ma ajute în dezvoltarea profesionala dobândită pana acum în domeniul Construcțiilor civile.Pe parcursul a 9 ani de munca am încercat sa .

Dr Tudor Groza is a seasoned researcher and professional in computational phenotyping for complex and rare diseases and standardization of phenotype nomenclature in genomics and clinical practice, with over fifteen years experience in knowledge representation, information extraction, natural language processing, and machine learning. .Loop is the open research network that increases the discoverability and impact of researchers and their work. Loop enables you to stay up-to-date with the latest discoveries and news, connect with researchers and form new collaborations.Phenotypes have gained increased notoriety in the clinical and biological domain owing to their application in numerous areas such as the discovery of disease genes and drug targets, phylogenetics and pharmacogenomics. Phenotypes, defined as observable characteristics of organisms, can be seen as on .

Background: Phenotypes identified during dysmorphology physical examinations are critical to genetic diagnosis and nearly universally documented as free-text in the electronic health record (EHR).Tudor Groza. Phenomics Team Leader. tudor [at] ebi.ac.uk ORCID: 0000-0003-2267-8333. Edit. The acceleration of translational and clinical applications of genomic technologies relies on both the externalisation and systematic harmonisation of the knowledge surrounding genes, disorders, exposures and phenotypes. We aim to contribute to the . Tudor Groza joins EMBL-EBI as our new Phenomics Team Lead. This newly established team will work closely with the Samples, Phenotypes and Ontologies Team. We found out from Tudor exactly what this new role will entail.

Articles 1–20. ‪European Bioinformatics Institute‬ - ‪‪Cited by 7,169‬‬ - ‪Deep phenotyping‬ - ‪Phenotype ontologies‬ - ‪Text mining‬ - ‪Phenotype-genotype integration‬ - ‪Phenotype-driven.

‪Tudor Groza‬

Tudor Groza is an experienced computer scientist with a background in knowledge representation, ontologies, natural language processing and artificial intelligence in precision medicine.

Tudor Groza Department of Clinical Genetics, Department of Biomedical and Clinical Sciences, Centre for Rare Diseases in Southeast Region of Sweden, Linköping University, Linköping, Sweden .Tudor GROZA, Phenomics Team Leader | Cited by 4,357 | of Garvan Institute of Medical Research, Darlinghurst | Read 134 publications | Contact Tudor GROZA.

Profile of Tudor Groza - Phenomics Team Leader Behind its outstanding technical infrastructure and world-renowned life science expertise, EMBL-EBI is a medium-sized organisation with a small-company feel. The importance of FAIR (Findability, Accessibility, Interoperability, and Reusability) and CARE (Collective benefit, Authority to control, Responsibility, and Ethics) data management is emphasized, along with the need for enhanced and continuing education in medical genomics.Tudor Groza. Phenomics Team Leader. tudor [at] ebi.ac.uk. ORCID: 0000-0003-2267-8333. The acceleration of translational and clinical applications of genomic technologies relies on both the externalisation and systematic harmonisation of the knowledge surrounding genes, disorders, exposures and phenotypes.

Tudor Groza authored at least 68 papers between 2006 and 2024. Dijkstra number of four. Erdős number of three.

Tudor GROZA

Pushing the boundaries of rare disease diagnostics with the help

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tudor groza|Phenomics – Building computational phenotyping services
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